- s -
- SC()
: SC
- scaleVariables()
: Ecosystem
, Keeper
- SCAmounts()
: SCAmounts
- SCNumbers()
: SCNumbers
- SCRatios()
: SCRatios
- SCSimple()
: SCSimple
- sdevLength()
: PopStatistics
- seekg()
: CommentStream
- SelectFunc()
: SelectFunc
- send()
: SlaveCommunication
- sendAll()
: StrStack
- sendToMaster()
: SlaveCommunication
- sendTop()
: StrStack
- setCI()
: InitialCond
, Prey
, RenewalData
- setDataEncode()
: PVMConstants
- setFleetsAndStocks()
: CatchDistribution
, CatchInKilos
, CatchStatistics
, Likelihood
, MigrationPenalty
, MigrationProportion
, ProgLikelihood
, Recaptures
, RecStatistics
, SIByAcousticOnStep
, SIByAgeOnStep
, SIByEffortOnStep
, SIByFleetOnStep
, SIByLengthOnStep
, SIOnStep
, StockDistribution
, SurveyDistribution
, SurveyIndices
- setInitialParamFile()
: MainInfo
- setIntercept()
: Regression
- setLikelihood()
: LikelihoodPrinter
, Printer
, SummaryPrinter
- setLogFile()
: ErrorHandler
- setLogLevel()
: ErrorHandler
- setMainGadgetFile()
: MainInfo
- setNaNFlag()
: ErrorHandler
- setOptInfoFile()
: MainInfo
- setOutputFile()
: PrintInfo
- setParamOutFile()
: PrintInfo
- setPrecision()
: PrintInfo
- setPredAndPrey()
: PredatorPreyPrinter
, PredatorPrinter
, Printer
- setPredator()
: PredatorOverPrinter
, Printer
- setPredatorsAndPreys()
: SC
, SCRatios
, SCSimple
, StomachContent
, UnderStocking
- setPredLength()
: AndersenSuitFunc
, ExpSuitFuncA
, RichardsSuitFunc
, SuitFunc
- setPrey()
: PopPredator
, Predator
, PreyOverPrinter
, Printer
, StockPreyFullPrinter
, StockPreyPrinter
- setPreyLength()
: AndersenFleetSuitFunc
, AndersenSuitFunc
, ExpSuitFuncA
, ExpSuitFuncL50
, GammaSuitFunc
, InverseSuitFunc
, RichardsSuitFunc
, StraightSuitFunc
, StraightUnboundedSuitFunc
, SuitFunc
- setPrintFinalFile()
: MainInfo
- setPrintInitialFile()
: MainInfo
- setPrintIteration()
: PrintInfo
- setRunOptimise()
: ErrorHandler
- setsize()
: ModelVariableVector
, TimeVariableVector
- setSlope()
: Regression
- setStock()
: Maturity
, MaturityA
, MaturityB
, MaturityC
, MaturityD
, Printer
, SpawnData
, Stock
, StockFullPrinter
, StockPrinter
, StockStdPrinter
, StrayData
, Tags
, Transition
- setStream()
: CommentStream
- setString()
: Keeper
- setTagged()
: Maturity
, Stock
, StrayData
, Transition
- setTaggedStock()
: Stock
- setTimeMultiplier()
: LengthPredator
, Predator
- setToZero()
: AgeBandMatrix
, AgeBandMatrixRatio
, DoubleMatrix
, DoubleVector
, IntMatrix
, IntVector
, PopInfo
- setValue()
: Formula
, ModelVariable
, Multinomial
- setWeights()
: Regression
- showCorrectUsage()
: MainInfo
- showUsage()
: MainInfo
- SIByAcousticOnStep()
: SIByAcousticOnStep
- SIByAgeOnStep()
: SIByAgeOnStep
- SIByEffortOnStep()
: SIByEffortOnStep
- SIByFleetOnStep()
: SIByFleetOnStep
- SIByLengthOnStep()
: SIByLengthOnStep
- Simulate()
: Ecosystem
- SimulateAndUpdate()
: Ecosystem
- SIOnStep()
: SIOnStep
- Size()
: AddressKeeperVector
, AgeBandMatrixPtrVector
, AgeBandMatrixRatioPtrVector
, BaseClassPtrVector
, CharPtrVector
, ConversionIndexPtrVector
, DoubleMatrixPtrVector
, DoubleVector
, FleetPtrVector
, FormulaMatrixPtrVector
, FormulaVector
, IntVector
, LikelihoodPtrVector
, MigrationAreaPtrVector
, ModelVariableVector
, OptInfoPtrVector
, OtherFoodPtrVector
, ParameterVector
, PopInfoIndexVector
, PopInfoVector
, PopRatioIndexVector
, PopRatioVector
, PredatorPtrVector
, PreyPtrVector
, PrinterPtrVector
, RectanglePtrVector
, StockPtrVector
, SuitFuncPtrVector
, TagPtrVector
, TimeVariableVector
- SlaveCommunication()
: SlaveCommunication
- Solve()
: LUDecomposition
- Spawn()
: SpawnData
- SpawnData()
: SpawnData
- startNetCommunication()
: SlaveCommunication
- StochasticData()
: StochasticData
- Stock()
: Stock
- StockAggregator()
: StockAggregator
- StockDistribution()
: StockDistribution
- StockFullPrinter()
: StockFullPrinter
- stockIndex()
: Tags
- StockPredator()
: StockPredator
- StockPrey()
: StockPrey
- StockPreyAggregator()
: StockPreyAggregator
- StockPreyFullPrinter()
: StockPreyFullPrinter
- StockPreyPrinter()
: StockPreyPrinter
- StockPrinter()
: StockPrinter
- StockPtrVector()
: StockPtrVector
- StockStdPrinter()
: StockStdPrinter
- StockVariable()
: StockVariable
- StomachContent()
: StomachContent
- stopNetCommunication()
: SlaveCommunication
- storeAreas()
: LivesOnAreas
- storeConsumptionALK()
: Tags
- storeMatureStock()
: Maturity
- storeMatureTagStock()
: Maturity
- storeStrayingStock()
: StrayData
- storeString()
: StrStack
- storeTransitionStock()
: Transition
- storeVariables()
: Ecosystem
, Keeper
- storeVectors()
: LinearRegression
, LogLinearRegression
, LogWeightRegression
, Regression
, WeightRegression
- StraightSelectFunc()
: StraightSelectFunc
- StraightSuitFunc()
: StraightSuitFunc
- StraightUnboundedSuitFunc()
: StraightUnboundedSuitFunc
- StrayData()
: StrayData
- StrStack()
: StrStack
- Subtract()
: AgeBandMatrix
, Prey
- SuitFunc()
: SuitFunc
- SuitFuncPtrVector()
: SuitFuncPtrVector
- Suits()
: Suits
- Sum()
: FleetEffortAggregator
, FleetPreyAggregator
, Grower
, LengthPredator
, LengthPrey
, PopInfoVector
, PredatorAggregator
, PredatorOverAggregator
, PredatorPreyAggregator
, Prey
, PreyOverAggregator
, RecAggregator
, SIByAcousticOnStep
, SIByAgeOnStep
, SIByEffortOnStep
, SIByFleetOnStep
, SIByLengthOnStep
, SIOnStep
, StockAggregator
, StockPredator
, StockPrey
, StockPreyAggregator
- sumColumns()
: AgeBandMatrix
- SummaryPrinter()
: SummaryPrinter
- SurveyDistribution()
: SurveyDistribution
- SurveyIndices()
: SurveyIndices