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Plot model biomass from a retrospective analysis

Usage

plot_retro(
  retro_fit,
  var = "total.biomass",
  by_stock = TRUE,
  min_catch_length = NULL,
  base_size = 8,
  ncol = NULL
)

Arguments

retro_fit

A list of g3_fit objects that differ in their terminal year, i.e. the result of a retrospective analysis. The first object should have no years removed and the objects should be sorted chronologically with increasing number of years removed.

var

Character argument defining the variable to plot. Only "total.biomass" and "hr" are currently implemented.

by_stock

Logical indicating whether to produce plots by stock in addition to total biomass.

min_catch_length

Numeric value defining the minimum catch length (size), which will be used to filter (>=) the model population before calculating harvest rates using catches. Combines all stocks. Turn of by setting to NULL (default). Set to 0 to get HR for the entire model population. See Details.

base_size

Base size parameter for ggplot. See ggtheme.

ncol

Number of columns to be used in the plot.

Value

A ggplot object.