Save diagnostic graphs to a single html document
make_html.RdSave diagnostic graphs to a single html document
Usage
make_html(
fit,
path,
harvest_rate = TRUE,
file_name = "model_output_figures.html",
template = "standard"
)Arguments
- fit
A gadget fit object. See
g3_fit.- path
Directory path for saving the html output.
- harvest_rate
A Logical value, if
TRUEthe harvest rate will be plotted, ifFALSEthe fishing mortality will be plotted.- file_name
Character specifying the name of the html file without path. Must include the file extension.
- template
Character specifying the html template to use. See details.
Value
Returns nothing, but makes the requested file. See the webpage for example output.
Details
The package contains html templates tailored for different stocks needed by the authors. Specify the name in the template argument. Current alternatives are:
- standard
Standard model output figures. Use the
harvest_rateargument to switch between F and HR figures.- iceland
Output tailored for Icelandic stock assessment.
- nea_ghl
Output tailored for Northeast Arctic Greenland halibut assessment.