Save diagnostic graphs to a single html document

Usage

make_html(
  fit,
  path = getwd(),
  harvest_rate = TRUE,
  file_name = "model_output_figures.html",
  template = "standard",
  model_name = "Gadget model output"
)

Arguments

fit: A gadget fit object. See g3_fit.
path: Directory path for saving the html output. Defaults to working directory.
harvest_rate: A Logical value, if TRUE the harvest rate will be plotted, if FALSE the fishing mortality will be plotted.
file_name: Character specifying the name of the html file without path. Must include the file extension.
template: Character specifying the html template to use. See details.
model_name: Character specifying the name of the model when "standard template is used.

Value

Returns nothing, but makes the requested file. See the webpage for example output.

Details

The package contains html templates tailored for different stocks needed by the authors. Specify the name in the template argument. Current alternatives are:

standard: Standard model output figures. Use the harvest_rate argument to switch between F and HR figures.
iceland: Output tailored for Icelandic stock assessment.
nea_ghl: Output tailored for Northeast Arctic Greenland halibut assessment.