Plot stock distribution data for a gadget3 model — dplot

The dplot functions plot data passed to a gadget3 model instead of data from the model or fit objects.

Usage

dplot_stockdist(
  x,
  stock_col = "maturity_stage",
  proportion = FALSE,
  group_by_sex = FALSE,
  sexes = c(female = "^female", male = "^male"),
  colors = NULL,
  scales = "free_y",
  dir = "v",
  base_size = 8,
  ...
)

Arguments

x: A gadget3 ready data frame created using mfdb, g3_data or add_g3_attributes.
stock_col: Character defining the name of the column separating stocks.
proportion: Logical indicating whether to plot proportion of stocks instead of absolute numbers.
group_by_sex: Logical indicating whether to take the proportions by sex (TRUE) or by all stocks (FALSE). Used only when proportion = TRUE
sexes: Named vector of length two containing regular expressions separating sexes in stock_col. See the default as an example.
colors: A vector of colors to be used for stocks. If NULL, scales::hue_pal() will be used
scales: Character specifying the scales argument passed to facet_wrap. Defaults to "free_y".
dir: Character specifying the direction of the facets ("h" for horizontal, "v" for vertical). See facet_wrap. Defaults to "v" unlike in facet_wrap to make it easier to follow length and age groups across years.
base_size: Base size parameter for ggplot. See ggtheme.
...: Additional arguments passed to facet_wrap.

Value

A ggplot object.

Examples

data(stockdist_example)
dplot_stockdist(stockdist_example)

dplot_stockdist(stockdist_example, proportion = TRUE)

dplot_stockdist(stockdist_example, proportion = TRUE, group_by_sex = TRUE)