gadget2/reference/sibyfleetonstep_8h_source.html

 #ifndef sibyfleetonstep_h

 #define sibyfleetonstep_h


 #include "sionstep.h"

 #include "fleetpreyaggregator.h"


 class SIByFleetOnStep : public SIOnStep {

 public:

   SIByFleetOnStep(CommentStream& infile, const IntMatrix& areas,

     const DoubleVector& lengths, const CharPtrVector& areaindex,

     const CharPtrVector& lenindex, const TimeClass* const TimeInfo,

     const char* datafilename, const char* givenname, int bio);

   virtual ~SIByFleetOnStep();

   virtual void Sum(const TimeClass* const TimeInfo);

   virtual void setFleetsAndStocks(FleetPtrVector& Fleets, StockPtrVector& Stocks);

   virtual void Print(ofstream& outfile) const { aggregator->Print(outfile); };

 protected:

   FleetPreyAggregator* aggregator;

 };


 #endif

CharPtrVector
This class implements a dynamic vector of char values.
Definition: charptrvector.h:8

CommentStream
This is the class used to strip comments (and whitespace) from any input stream.
Definition: commentstream.h:40

DoubleVector
This class implements a dynamic vector of double values.
Definition: doublevector.h:11

FleetPreyAggregator
This is the class used to aggregate fleet catch information.
Definition: fleetpreyaggregator.h:18

FleetPreyAggregator::Print
void Print(ofstream &outfile) const
This will print the aggregator information to the ofstream specified.
Definition: fleetpreyaggregator.cc:49

FleetPtrVector
This class implements a dynamic vector of Fleet values.
Definition: fleetptrvector.h:10

IntMatrix
This class implements a dynamic vector of IntVector values.
Definition: intmatrix.h:10

SIByFleetOnStep
This is the class used to calculate a likelihood score by fitting the model population to fleet based...
Definition: sibyfleetonstep.h:11

SIByFleetOnStep::setFleetsAndStocks
virtual void setFleetsAndStocks(FleetPtrVector &Fleets, StockPtrVector &Stocks)
This will select the fleets and stocks required to calculate the survey index likelihood score.
Definition: sibyfleetonstep.cc:25

SIByFleetOnStep::aggregator
FleetPreyAggregator * aggregator
This is the FleetPreyAggregator used to collect information about the relevant fleets for the survey ...
Definition: sibyfleetonstep.h:48

SIByFleetOnStep::SIByFleetOnStep
SIByFleetOnStep(CommentStream &infile, const IntMatrix &areas, const DoubleVector &lengths, const CharPtrVector &areaindex, const CharPtrVector &lenindex, const TimeClass *const TimeInfo, const char *datafilename, const char *givenname, int bio)
This is the SIByFleetOnStep constructor.
Definition: sibyfleetonstep.cc:9

SIByFleetOnStep::Print
virtual void Print(ofstream &outfile) const
This function will print the SIByFleetOnStep information.
Definition: sibyfleetonstep.h:48

SIByFleetOnStep::~SIByFleetOnStep
virtual ~SIByFleetOnStep()
This is the default SIByFleetOnStep destructor.
Definition: sibyfleetonstep.cc:20

SIByFleetOnStep::Sum
virtual void Sum(const TimeClass *const TimeInfo)
This function will sum the survey index by fleet length data.
Definition: sibyfleetonstep.cc:66

SIOnStep
This is the base class used to calculate a likelihood score by fitting a regression line to the model...
Definition: sionstep.h:29

StockPtrVector
This class implements a dynamic vector of Stock values.
Definition: stockptrvector.h:10

TimeClass
This is the class used to store information about the timesteps used for the current model.
Definition: areatime.h:87

fleetpreyaggregator.h

sionstep.h